Aaron Adams

Adams, A.J., J.P. Lewis, A.M. Kroetz. 2021. Bonefish (Albula vulpes) home range to

spawning site linkages support a marine national park designation. Aquatic Conservation. https://doi.org/10.1002/aqc.3534

Lombardo, S.M., A.J. Adams, A.J. Danylchuk, C.A. Luck, M.J. Ajemian. 2020. Novel

deep-water spawning patterns of a shallow water fish. Marine Biology. https://doi.org/10.1007/s00227-020-03799-3

Raynal, J.M, R. Weeks, R.L. Pressey, A.J. Adams, A. Barnett, S.J. Cooke, M. Sheaves.

2020. Habitat-dependent outdoor recreation and conservation organizations provide potential for recreational fishers to contribute to conservation of coastal marine ecosystems. Global Ecology and Conservation. https://doi.org/10.1016/j.gecco.2020.e01342

Brownscombe, J. L.Griffin, D. Morley, A. Acosta, J. Hunt, S. Lowerre-Barbieri, A. Adams,

A. Danylchuk, S. Cooke. 2020. Application of machine learning algorithms- to identify cryptic reproductive habitats using diverse information sources. Oecologia. 194:283-298.

Mejri, S., A. Adams, J. Shenker, A. Cianciotto, C. Robinson, V. Uribe, P. Wills. 2020.

Lipid composition and utilization in early stage leptocephalus larvae of bonefish (Albula vulpes). Lipids. DOI 10.1002/lipd.12278

Navarro-Martínez, Z.M., J. Angulo-Valdés, L. García-Córdova, M.J. McLarty, D.

Gonzalez-Socoloske, A.J. Adams. 2020. Habitat characterization of juvenile Atlantic tarpon (Megalops atlanticus) in Isle of Youth, Cuba. Journal of Gulf and Caribbean Research. 31(1):SC13-SC17. https://doi.org/10.18785/gcr.3101.08

Perez, A.U., J.J. Schmitter-Soto, A.J. Adams. 2020. Towards a new shift in conservation

and management of a fishery system and protected areas using bonefish (Albula vulpes) as an umbrella species in Belize and Mexico. Environmental Biology of Fishes. 103:1359-1370. https://doi.org/10.1007/s10641-020-01028-w

Kendall, M.S., B.L. Williams, A. Ruffo, A. Winship, L. Siceloff, A. Adams, W. Tobias.

2020. Old-school data show more species but lower abundance of juvenile fish 25 years ago in a Caribbean mangrove estuary. Bulletin of Marine Science. https://doi.org/10.5343/bms.2020.0005

Dunn, C.D., L.J. Campbell, E.M. Wallace, A.J. Danylchuk, S.J. Cooke, A.D. Shultz, B.D.

Black, J.W. Brownscombe, L.P. Griffin, D.P. Philipp, A.J. Adams, T.L. Goldberg. 2020. Gill microbiomes of bonefish (Albula vulpes) in the Florida Keys and The Bahamas show site specificity and differential abundance of disease-associated bacteria. Marine Biology. 167:85. https://doi.org/10.1007/s00227-020-03698-7

Halstead, W.R., S. Mejri, A.Cianciotto, P. Wills, T.E. Van Leeuwen, A.J. Adams, J.M.

Shenker. 2020. Induced spawning and embryonic and early larval development of bonefish (Albula vulpes). Journal of Fish Biology. 96:825-830. DOI: 10.1111/jfb.14250

Brownscombe J.W., L.P. Griffin, D. Morley, A. Acosta, J. Hunt, S.K. Lowerre-Barbieri, G.T.

Crossin, S.J. Iverson, R. Boucek, A.J. Adams, S.J. Cooke, A.J. Danylchuk. 2019. Seasonal occupancy and connectivity amongst nearshore flats and reef habitats by permit (Trachinotus falcatus): Considerations for fisheries management. Journal of Fish Biology. 96(2):469-479. DOI:10.1111/jfb.14227

Holder, P.E., L.P. Griffin, A.J. Adams, A.J. Danylchuk, S.J. Cooke, J.W. Brownscombe.

2020. Stress, predators, and survival: Exploring Permit (Trachinotus falcatus) catch-and-release fishing mortality in the Florida Keys. Journal of Experimental Marine Biology and Ecology. Volume 524. DOI:10.1016/j.jembe.2019.151289

Mejri, S., C. Luck, P. Wills, A.J. Adams, J. Shenker, M. Ajemian. 2019. Reproductive

physiology of bonefishes (Albula spp.) across the northwest Bahamas. Fish Physiology and Biochemistry. 46(2):699-712. DOI:10.1007/s10695-019-00743-1

Brownscombe, J.W., L.P. Griffin, J.M Chapman, D. Morley, A. Acosta, J. Hunt, G.T.

Crossin, S.J. Iverson, A.J. Adams, S.J. Cooke, A.J. Danylchuk. 2019. A practical method to account for variation in detection range in acoustic telemetry arrays to accurately quantify the spatial ecology of aquatic animals. Methods in Ecology and Evolution. 11:82-92. DOI: 10.1111/2041-210X.13322

Luo J., J.S. Ault, B. Ungar, M.F. Larkin, T.N. Davidson, D.R. Bryan, S.G. Smith, N.A.

Farmer, S. Holt, A. S. Alford, A.J. Adams, R. Humston, A.M. Marton, J. Robertson. 2019. Long distance migrations and local movements of Atlantic Tarpon unveiled by two decades of satellite tagging in the central western Atlantic Ocean. Fish and Fisheries. 21(2):290-318. DOI: 10.1111/faf.12430

Perez, A.U., J.J. Schmitter-Soto, A.J. Adams, R. Herrera-Pavón. 2019. Influence of

environmental variables on abundance and movement of bonefish (Albula vulpes) between the Caribbean Sea and a tropical estuary in Belize and Mexico. Environmental Biology of Fishes. 102:1421-1434. DOI:10.1007/s10641-019-00916-0

Mejri, S., W.R. Halstead, C.A. Luck, C. Robinson, T.E. Van Leeuwen, A.J. Adams, J.

Shenker, M.J. Ajemian, P.S. Wills. 2019. A Novel attempt to artificially spawn captive bonefish (Albula spp.). Aquaculture Research. DOI:10.1111/are.14207

Brownscombe J.W., A.J. Adams, N. Young, L.P. Griffin, P. Holder, J. Hunt, A. Acosta, D.

Morley, R. Boucek, S.J. Cooke, A.J. Danylchuk. 2019. Bridging the knowledge-action gap: A case of research rapidly impacting recreational fisheries policy. Marine Policy 104:210-215.

Zeng, X., A.J. Adams, M. Roffer, R. He. 2019. Potential connectivity among spatially

distinct management zones for bonefish (Albula vulpes) via larval dispersal. Environmental Biology of Fishes. 102(2):233-252.

Adams, A.J., J.S. Rehage, S.J. Cooke. 2019. A multi-methods approach is essential for

effective conservation and management of recreational flats fisheries. Environmental Biology of Fishes. 102(2):105-115.

Brownscombe J.W., A.J. Danylchuk, A.J. Adams, B. Black, R. Boucek, M. Power, J.S.

Rehage, R.O. Santos, R.W. Fisher, B. Horn, C.R. Haak, S. Morton, J. Hunt, R. Ahrens, M.S. Allen, J. Shenker, S.J. Cooke. 2019. Bonefish in South Florida: status, threats and research needs. Environmental Biology of Fishes. 102(2):329-348.

Luck, C., S. Mejri, P. Wills, M. Riche, J. Shenker, A. Adams, M. Ajemian. 2019.

Gonadal hormone concentrations and oocyte development of wild bonefish (Albula vulpes). Environmental Biology of Fishes. 102(2):209-219.

Santos, R.O., J.S. Rehage, E.K.N. Kroloff, J.E. Heinen, A.J. Adams. 2019. Combining

data sources to elucidate spatial patterns in 1 recreational catch and effort: fisheries-dependent data and local ecological knowledge applied to the South Florida bonefish fishery. Environmental Biology of Fishes. 102(2):299-317.

Mejri, S. C. Luck, R. Tremblay, M. Riche, A. Adams, M.J. Ajemian, J. Shenker, P. Wills.

2019. Bonefish (Albula vulpes) oocyte lipid classes and fatty acid profiles during a reproductive cycle. Environmental Biology of Fishes. 102(2):221-232.

Rehage, J.S., R.O. Santos, E.K.N. Kroloff, J.E. Heinen, Q. Lai, B. Black, R.E. Boucek, A.J.

Adams. 2019. How has the quality of bonefishing changed? Quantifying temporal patterns in the South Florida Flats Fishery using local ecological knowledge. Environmental Biology of Fishes. 102(2):285-298.

Perez, A.U., J.J. Schmitter-Soto, A.J. Adams, W.D. Heyman. 2019. Connectivity

mediated by seasonal bonefish (Albula vulpes) migration between the Caribbean Sea and a tropical estuary of Belize and Mexico. Environmental Biology of Fishes. 102(2):197-207.

Cianciotto, A.C. J.M. Shenker, A.J. Adams, J.J. Rennert, D. Heuberger. 2019.

Modifying mosquito impoundment management procedures to enhance nursery habitat value for juvenile common snook (Centropomus undecimalis) and Atlantic tarpon (Megalops atlanticus). Environmental Biology of Fishes. 102(2):403-416.

Wilson, J.K., A.J. Adams, R.N. Ahrens. 2019. Identification and Characterization of

Juvenile Atlantic Tarpon (Megalops atlanticus) Nursery Habitats for Inclusion in Fisheries Management. Environmental Biology of Fishes. 102(2):383-402.

Rennert, J., J.M. Shenker, J. Angulo, A.J. Adams. 2019. Age and growth of bonefish,

Albula species among Cuba habitats. Environmental Biology of Fishes. 102(2):253-265.

Danylchuk, A.J., J. Lewis, Z. Jud, J. Shenker, A.J. Adams. 2019. Behavioral

observations of bonefish during pre-spawning aggregations in The Bahamas: clues to drive broader conservation efforts. Environmental Biology of Fishes. 102(2):175-184.

Boucek, R.E., J.P. Lewis, B.D. Stewart, Z.R. Jud, E. Carey, A.J. Adams. 2019.

Measuring site fidelity and homesite-to-pre-spawning site connectivity of bonefish (Albula vulpes): using mark-recapture to inform habitat conservation. Environmental Biology of Fishes. 102(2):185-195.

Adams, A.J., J. Shenker, Z. Jud, J. Lewis, E. Carey, A.J. Danylchuk. 2019. Identifying

pre-spawning aggregation sites for bonefish (Albula vulpes) in the Bahamas to inform

habitat protection and species conservation. Environmental Biology of Fishes. 102(2): 159-173.

Griffin, L.P., J.W. Brownscombe, A.J. Adams, R.E. Boucek, J.T. Finne, M.R. Heithouse,

J.S. Rehage, S.J. Cooke, A.J. Danylchuk. 2018. Keeping up with the Silver King: using cooperative acoustic telemetry networks to quantify the movements of Atlantic tarpon (Megalops atlanticus) in the coastal waters of the southeastern United States. Fisheries Research. 205:65-76.

Santos, R., J.S. Rehage, A.J. Adams, B.D. Black, J. Osborne, E.K.N. Kroloff. 2017.

Quantitative assessment of a data-limited recreational bonefish fishery using a timeseries

of fishing guides reports. PLOS ONE. 12(9): e0184776. https://doi.org/10.1371/journal.pone.0184776

Adams, A.J. 2017. Guidelines for evaluating the suitability of catch and release fisheries:

lessons learned from Caribbean flats fisheries. Fisheries Research. 186:672-680.

Ahrens, R., Z, Slagel, S, Stephens, A.J. Adams. 2015. Evaluating the efficacy of the

Florida Key’s angler-assisted permit tagging program. Environmental Biology of Fishes. 98:2251-2261.

Adams, A.J. and S.J. Cooke. 2015. Advancing the science and management of flats

fisheries for bonefish, tarpon, and permit. Environmental Biology of Fishes. 98:2123-2131.

Black, B.D., A.J. Adams, and C. Bergh. 2015. Mapping of stakeholder activities and

habitats to inform conservation planning for a national marine sanctuary. Environmental Biology of Fishes. 98:2213-2221.

Adams, A.J. and K.J. Murchie. 2015. Recreational fisheries as conservation tools for

mangrove habitats. Pages 43-56 in K.J. Murchie and P.P. Daneshgar, editors, Mangroves

as fish habitat. American Fisheries Society, Symposium 83. Bethesda, MD.

Barbour, A.B., A.J. Adams, and K. Lorenzen. 2014. Emigration-corrected seasonal survival

of a size-structured fish population in a nursery habitat. Marine Ecology Progress Series. 514:191-205.

Barbour, A.B., A.J. Adams, K. Lorenzen. 2014. Size-based, seasonal, and multidirectional

movements of an estuarine fish species in a habitat mosaic. Marine Ecology Progress Series. 507:263-276.

Adams, A.J., A.Z. Horodysky, R.S. McBride, T.C. MacDonald, J. Shenker, K. Guindon,

H.D. Harwell, R. Ward, and K. Carpenter. 2013. Global conservation status and research needs for tarpons (Megalopidae), ladyfishes (Elopidae), and bonefishes (Albulidae). Fish and Fisheries. 15(2):280-311.

Barbour, A.B., R.E. Boucek, and A.J. Adams. 2012. Effect of pulsed gastric lavage on

apparent survival of a juvenile fish in a natural system. Journal of Experimental Marine

Biology and Ecology. 422-423:107-113.

Barbour, A.B., A.J. Adams, T. Yess, D.C. Behringer, and R.K. Wolfe. 2012. Comparison

and cost-benefit analysis of PIT tag antennae resighting and seine-net recapture techniques for survival analysis of an estuarine-dependent fish. Fisheries Research. 121-122:153-160.

Barbour, A.B. and A.J. Adams. 2012. Biologging to examine multiple life stages of an

estuarine-dependent fish, common snook, Centropomus undecimalis. Marine Ecology Progress Series. 457:241-250.

Adams, A.J., J.E. Hill, B.N. Kurth, and A.B. Barbour. 2012.  Effects of a thermal

disturbance on a subtropical, estuarine-dependent fish. Gulf and Caribbean Research. 24: 13-21.

Barbour, A.B., A.J. Adams, D.C. Behringer, T. Yess, and R.K. Wolfe. 2011. PIT tag antenna

arrays as fishery monitoring tools in tropical environments. Proceedings of the 63^rd Gulf and Caribbean Research Institute. 63:118-124.

Boucek, R.E. and A.J. Adams. 2011. Comparison of retention rates for three tag

types in common snook, Centropomus undecimalis. North American Journal of Fisheries Management. 31(4):693-699.

Adams, A.J., J.E. Hill and C. Samoray. 2011. Characteristics of spawning ground

fidelity by a diadromous fish: a multi-year perspective. Environmental Biology of Fishes. 92:403-411.

Mateo, I., E. Durbin, R. Appeldoorn, A. Adams, F. Juanes, and D. Durant. 2011. Inferred

growth of juvenile French grunts (Haemulon flavolineatum) and schoolmaster (Lutjanus apodus) in mangrove and seagrass habitats. Bulletin of Marine Science. 87(3):339-350.

Mateo I., E. Durbin, R. Appeldoorn, A. Adams, F. Juanes, R. Kingsley, P. Swart, and D.

Durant. 2010. Role of mangroves as nurseries for French grunt Haemulon flavolineatum and schoolmaster Lutjanus apodus assessed by otolith elemental fingerprints. Marine Ecology Progress Series. 402:197-212.

Adams, A.J., R.K. Wolfe, N. Barkowski, and D. Overcash. 2009. Fidelity to spawning

grounds by a catadromous fish, Centropomus undecimalis. Marine Ecology Progress Series. 389:213-222.

Adams, A.J. and J.P. Ebersole. 2009. Mechanisms affecting recruitment patterns of fish and

decapods in tropical marine ecosystems. Chapter 6 In I. Nagelkerken (ed) Ecological linkages among tropical coastal ecosystems. Springer. New York.

Adams, A.J., R.K. Wolfe, and C.A. Layman. 2009. Preliminary examination of how human-

driven freshwater flow alteration affects trophic ecology of juvenile snook (Centropomus undecimalis) in estuarine creeks. Estuaries and Coasts. 32(4):819-828.

Vásquez-Yeomans, L, E. Sosa-Cordero, M.R. Lara, A.J. Adams, and J.A. Cohuo. 2009.

Patterns of distribution and abundance of larval Albula spp. (Albulidae) in the western Caribbean and adjacent areas. Ichthyological Research. 56(3):266-275.

Danylchuk, A.J., A.J. Adams, S.J. Cooke, and C.D. Suski. 2008. An evaluation of the

injury and short-term survival of bonefish (Albula spp) as influenced by a mechanical fish handling device used by recreational anglers. Fisheries Research. 93(1-2):248-252.

Adams, A.J. and R.K. Wolfe. 2007. Occurrence and persistence of non-native Cichlasoma

urophthalmus (Family Cichlidae) in estuarine habitats of southwest Florida (USA): environmental controls and movement patterns. Marine and Freshwater Research. 58(10): 921-930.

Miller, R.J., A.J. Adams, J.P. Ebersole, and E. Ruiz. 2007. Evidence for positive density-

dependent effects in recovering Diadema antillarum populations. Journal of Experimental Marine Biology and Ecology. 349:215-222.

Adams, A.J., R.K. Wolfe, M.D. Tringali, E. Wallace, and G.T. Kellison. 2008. Rethinking

the status of Albula spp. biology in the Caribbean and Western Atlantic. In: J.S. Ault (ed)

Biology And Management of the World Tarpon And Bonefish Fisheries. CRC Press. Boca Raton, FL.

Adams, A.J. and R.K. Wolfe. 2006. Cannibalism of juveniles by adult Centropomus      undecimalis.  Gulf of Mexico Science. 24(1/2):11-13.

Adams, A.J., C. Dahlgren, G.T. Kellison, M.S. Kendall, C.A. Layman, J.A. Ley, I.

Nagelkerken, and J.E. Serafy.  2006. Nursery function of tropical backreef systems. Marine Ecology Progress Series. 318:287-301.

Adams, A.J., R.K. Wolfe, W.E. Pine III, and B. Thornton. 2006. Efficacy of PIT tags and an

autonomous antenna system to study the juvenile life stage of an estuarine-dependent fish. Estuaries and Coasts. 29(2):311-317.

Dahlgren, C., G.T. Kellison, A.J. Adams, B.M. Gillanders, M.S. Kendall, C.A. Layman, J.A.

Ley, I. Nagelkerken, J.E. Serafy. 2006. Marine nurseries and effective juvenile habitats: concepts and applications.  Marine Ecology Progress Series. 312:291-295.

Layman, C.A., C. Dahlgren, G.T. Kellison, A.J. Adams, B.M. Gillanders, M.S. Kendall, J.A.

Ley, I. Nagelkerken, J.E. Serafy. 2006. Reply Comment: Marine nurseries and effective juvenile habitats.  Marine Ecology Progress Series. 318:307-308.

Adams, A.J., R.K. Wolfe, G.T. Kellison, B.C. Victor. 2006. Patterns of juvenile habitat use and seasonality of settlement by permit, Trachinotus falcatus. Environmental Biology of Fishes. 75:209-217.

Adams, A.J.  2005.  Fish assemblages associated with an established (> 10 years old) artificial reef and an adjacent natural reef.  Proc. 47th Annual Gulf and Caribbean Fisheries Institute. 441-457.

Adams, A.J. and D.A. Blewett. 2004. Spatial patterns of estuarine habitat use and temporal patterns in abundance of juvenile permit, Trachinotus falcatus in Charlotte Harbor, Florida. Gulf and Caribbean Research. 16(2):129-139.

 Adams, A.J. and J.P. Ebersole. 2004. Resistance of coral reef fishes of back-reef and lagoon habitats to a hurricane.  Bulletin of Marine Science.75(1):101-113.

Adams, A.J. and J.P. Ebersole. 2004.  Processes influencing recruitment inferred from distributions of coral reef fishes. Bulletin of Marine Science. 75(2):153-174.

Adams, A.J., R.J. Miller, and J.P. Ebersole. 2004. Tethers make juvenile surgeonfishes (Acanthuridae) vulnerable to attacks by benthic invertebrates. Bulletin of Marine Science. 74(1):207-211.

Adams, A.J., J. V. Locascio, and B.D. Robbins. 2004. Microhabitat use by a post-settlement stage estuarine fish: evidence from relative abundance and predation among habitats. Journal of Experimental Marine Biology and Ecology. 299:17-33.

Miller, R.J., A.J. Adams, N.B. Ogden, J.C. Ogden, and J.P. Ebersole. 2003. Diadema antillarum 17 years after mass mortality. Coral Reefs. 22:181-187.

Adams, A.J. and J.P. Ebersole. 2002. Use of back-reef and lagoon habitats by coral reef fishes.  Marine Ecology Progress Series. 228:213-226.

Adams, A.J.  2001. Effects of a hurricane on two assemblages of coral reef fishes: multiple-year analysis reverses a false ‘snapshot’ interpretation.  Bulletin of Marine Science. 69(2): 341-356.

Adams. A.J. and W.J. Tobias. 1999.  Red mangrove prop-root habitat as a finfish nursery area: a case study of Salt River Bay, St. Croix, USVI. Proc. 46th Annual Gulf and Caribbean Fisheries Institute. 22-46.