Research Terms
Lee J-Sg, BM Hurr, DJ. Huber, CE Vallejos. 2015. Characterization of nucleases associated with ethylene-induced programmed cell death in immature cucumber fruit. Postharvest Biol. Tech. (Accepted 2/23/2015, In press).
Jiang Lg, JA Clavijog, L Sun, X Zhu, MS Bhaktag, SA Gezan, M Carvalhop, CE Vallejos, R Wu. 2015. Plastic expression of heterochrony quantitative trait loci (hQTL) for leaf growth in the common bean (Phaseolus vulgaris L.). New Phytol. DOI: 10.1111/nph.13386. http://onlinelibrary.wiley.com/doi/10.1111/nph.13386/full
Bo WHg, GF Fu, Z Wang, F Xu, Y Shen, J Xu, CE Vallejos, RL Wu. 2014. Systems mapping: How to map genes for biomass allocation towards an ideotype. Brief. Bioinform. 15, 660-669. http://bib.oxfordjournals.org/content/15/4/660.full.pdf+html.
Wang Zg, Y Wang, NT Wang, JX Wang, ZH Wang, CE Vallejos, RL Wu. 2014. Towards a comprehensive picture of the genetic landscape of complex traits. Brief Bioinform 15, 30-42. http://bib.oxfordjournals.org/content/15/1/30.full.
Clavijo-Michelangeli JCg, M Bhaktag, SA Gezan, KJ Boote, CE Vallejos. 2013. From flower to seed: Identifying phenological markers and reliable growth functions to model reproductive development in the common bean (Phaseolus vulgaris L.). Plant Cell Environ. 36, 2046-2058.
Hurr BM, DJ Huber, CE Vallejos, E Leeg, SA Sargent. 2013. Ethylene-induced overproduction of reactive oxygen species is responsible for the development of watersoaking in immature cucumber fruit. J Plant Phys. 170, 56-62. Impact Factor: 2.699
Wu RL, JG Cao, ZW Huang, ZW Huang, Z Wang, Gai, JY Gai, CE Vallejos. 2011. Systems mapping: how to improve the genetic mapping of complex traits through design principles of biological systems. BMC Systems Biology 5, 84. http://www.biomedcentral.com/1752-0509/5/84. Impact Factor: 2.85.
Hurr BM, DJ Huber, CE Vallejos. 2010. Features of programmed cell death precede watersoaking development in ethylene-treated immature cucumber fruit. Postharvest Biol. Tech. 58, 13-20.
Vallejos CE, V Jones, RE Stall, JB Jones, GV Minsavage, DC Schultz, R Rodrigues, LE. Olsen, M Mazourek. 2010. Characterization of two recessive genes controlling resistance to all races of bacterial spot in peppers. Theor. Appl. Genet. 121, 37-46.
He Qg, A Berg, Y Li, CE Vallejos, R Wu. 2010. Mapping genes for plant structure, development and evolution: functional mapping meets ontology. Trends Genet. 26, 39-46.
Hurr BM, DJ Huber, CE Vallejos, ST Talcott. 2009. Developmentally dependent responses of detached cucumber (Cucumis sativus L.) fruit to exogenous ethylene. Postharvest Biol. Tech.52, 207-215.
Schlueter JAp, JL Goicoechea, K Collura, N Gill, J-Y Lin, Y Yu, D Kudrna, A Zuccolo, CE Vallejos, J Tohme, M Blair, P McClean, RA Wing, SA Jackson. 2008. BAC-end sequence analysis and a draft physical map of the common bean (Phaseolus vulgaris L.) genome. Trop. Plant Biol. 1, 40-48.
Vallejos CE, NS Sakiyama, V Jones, S. Shanker. 2007. Adaptation of a silica membrane-based kit for purification of sequencing-ready BAC DNA. Plant Mol. Biol. Reporter 25, 11-16.
Hannah MA, V Geffroy, J Kopka, MW Blair, A Erban, CE Vallejos, AG Heyer, FE Sanders, PA Millner, DJ Pilbeam. 2007. Hybrid weakness controlled by the dosage-dependent lethal (DL) gene system in common bean (Phaseolus vulgaris) is caused by a shoot-derived inhibitory signal leading to salicylic acid-associated root death. New Phytol. 176, 537-549.
Subakan Og, B Jian, BC Vemuri, CE Vallejos. 2007. Feature preserving image smoothing using a continuous mixture of tensors. Proc. IEEE Int. Conf. Comput. Vis., 11: nihpa163297. doi: 10.1109/ICCV.2007.4408918.
Vallejos CE. 2007. An Expedient and Versatile Protocol for Extracting High-Quality Plant DNA. Cold Spring Harbor Protocols. doi:10.1101/pdb.prot4765. http://www.cshprotocols.org/ .
Messina CDg, JW Jones, KJ Boote, CE Vallejos. 2006. A gene-based model to simulate soybean development and yield responses to environment. Crop Sci. 46, 456-466.
Vallejos CE, G Astua-Mongep, V Jones, TR Plyler, NS Sakiyama, SA Mackenzie. 2006. Genetic and molecular characterization of the I locus of Phaseolus vulgaris. Genetics. 172, 1229-1242.
Hacisalihoglu Gg, JJ Hart, CE Vallejos, LV Kochian. 2004. The role of shoot-localized processes in the mechanism of Zn efficiency in common bean. Planta 218, 704-711.
Lal SKp, MJ Giroux, V Brendel, CE Vallejos, LC Hannah. 2003. The maize genome contains a Helitron insertion. Plant Cell 15, 381-391.
Pedrosa Ag, CE Vallejos, A Bachmair, D Schweizer. 2003. Integration of common bean (Phaseolus vulgaris) linkage and chromosomal maps. Theor. Appl. Genet. 106, 205-212.
Murray Jg, J Larseng, TE Michaels, A Schaafsma, CE Vallejos, KP Pauls. 2002. Identification of putative genes in bean (Phaseolus vulgaris) genomic (Bng) RFLP clones and their conversion to STSs. Genome 45, 1013-1024.
Astua-Monge Gp, A Lyznik, V Jones, SA Mackenzie, CE Vallejos. 2002. Evidence for a prokaryotic insertion-sequence contamination in eukaryotic sequences registered in different databases. Theor. Appl. Genet. 104, 48-53.
Lee JMg, D Grant, CE Vallejos, RC Shoemaker. 2001. Genome organization in dicots. II. Arabidopsis as a 'bridging species' to resolve genome evolution events among legumes. Theor. Appl. Genet. 103, 765-773.
Vallad Gg, M Rivkin, CE Vallejos, P McClean. 2001. Cloning and homology modelling of a Pto-like protein kinase family of common bean (Phaseolus vulgaris L.). Theor. Appl. Genet. 1031046-1058.
Astua-Monge Gg, GV Minsavage, RE Stall, CE Vallejos, MJ Davis, JB Jones. 2000. Xv4-vrxv4: A new gene-for-gene interaction identified between Xanthomonas campestris pv. vesicatoria race T3 and the wild tomato relative Lycopersicon pennellii. Mol. Plant Microbe In. 13, 1346-1355.
Vallejos CE, JJ Malandro, K Sheehy, MJ Zimmermann. 2000. Detection and cloning of expressed sequences linked to a target gene. Theor. Appl. Genet. 101, 1109-1113.
Plyler TR, CE Vallejos. 2000. Method for cloning restriction fragments containing the termini of BAC Inserts. BioTechniques 28, 1012-1018.
Rivkin MIg, CE Vallejos, PE McClean. 1999. Disease-resistance related sequences in common bean. Genome 42, 41-47.
Jones JW, A Kenig, CE Vallejos. 1999. Reduced state-variable tomato growth model. T ASAE, 42, 255-265.
Freyre Rg, PW Skrochg, V Geffroy, AF Adam-Blondon, A Shirmohamadali, WC Johnson, V Llaca, RO Nodari, PA Pereira, S-M Tsai, J Tohme, M Dron, J Nienhuis, CE Vallejos, P Gepts. 1998. Towards an integrated linkage map of common bean. 4. Development of a core linkage map and alignment of RFLP maps. Theor. Appl. Genet. 97, 847-856.
Sarria Rg, A Lyznik, CE Vallejos, SA Mackenzie. 1998. A cytoplasmic male sterility–associated mitochondrial peptide in common bean is post-translationally regulated. Plant Cell 10, 1217-1228.
Yu ZHp, RE Stall, CE Vallejos. 1998. Detection of genes for resistance to common bacterial blight of beans. Crop Sci. 38, 1290-1296.
Boutin SR, ND Young, TC Olson, ZH Yu, CE Vallejos, RC Shoemaker. 1995. Genome conservation among three legume genera detected with DNA markers. Genome 38, 928-937.
Yu ZH, JF Wang, RE Stall, CE Vallejos. 1995. Genomic localization of tomato genes that control a hypersensitive reaction to Xanthomonas campestris pv. vesicatoria (Doidge) Dye. Genetics 141, 675-682.
He Sg, ZH Yu, CE Vallejos, SA Mackenzie. 1995. Pollen fertility restoration by nuclear gene Fr in CMS common bean: an Fr linkage map and the mode of Fr action. Theor. Appl. Genet. 90, 1056-1062.
Wang JFg, RE Stall, CE Vallejos. 1994. Genetic analysis of a complex hypersensitive reaction to bacterial spot in tomato. Phytopathology 84, 126-132.
Vallejos CE, NS Sakiyama, CD Chase. 1992 A molecular marker-based linkage map of Phaseolus vulgaris L. Genetics 131, 733-740.
Bournival BLg. CE Vallejos. 1991. New sources of genetic resistance to race 3 of Fusarium wilt of tomato. Plant Disease 75, 281-284.
Chase CD, V M. Ortega, CE Vallejos. 1991. DNA restriction fragment length polymorphisms parallel isozyme diversity in Phaseolus vulgaris L. Theor. Appl. Genet. 81, 806-811.
Vallejos CE, CD Chase. 1991. An extended linkage map for the phaseolin linkage group of Phaseolus vulgaris L. Theor. Appl. Genet. 82, 353-357.
Vallejos CE, CD Chase. 1991. Linkage between isozyme markers and a locus affecting seed size in Phaseolus vulgaris L. Theor. Appl. Genet. 81, 413-419.
Vallejos CE. 1991. Low night temperatures have a differential effect on the diurnal cycling of gene expression in cold sensitive and tolerant tomatoes. Plant Cell Environ. 14, 105-112.
Bournival BLg, CE Vallejos, JW Scott. 1990. Genetic analysis of resistances to races 1 and 2 of Fusarium oxysporum f. sp. lycopersici in tomato from the wild tomato Lycopersicon pennellii. Theor. Appl. Genet. 79, 641-645.
Bournival BLg, JW Scott, CE Vallejos. 1989. An isozyme marker for resistance to race 3 of Fusarium oxysporum f. sp. lycopersici in tomato. Theor. Appl. Genet. 78, 489-494.
Vallejos CE, RW Pearcy. 1987. Differential low temperature acclimation capacity of two species of Lycopersicon. Can. J. Bot. 65, 1303-1307.
Vallejos CE, SD Tanksley, R Bernatzky. 1985. Localization in the tomato genome of DNA restriction fragments containing sequences homologous to the rRNA (45s), the major chlorophyll a/b binding polypeptide and the ribulose bisphosphate carboxylase genes. Genetics 112, 93-105.
Tanksley SD, CM Rick, CE Vallejos. 1984. Tight linkage between a nuclear male-sterile locus and an enzyme marker in tomato: Potential application in breeding. Theor. Appl. Genet. 68, 109-114.
Vallejos CE, SD Tanksley. 1983. Segregation of low temperature tolerance and isozymes in an interspecific backcross of tomato. Theor. Appl. Genet. 66, 241-247.
Vallejos CE, JM Lyons, RW Breidenbach, M Miller. 1983. Characterization of a differential low temperature growth response in two species of Lycopersicon: The plastochron as a tool. Planta 159, 487-496.